Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939846.1_cds_XP_016484276.1_75305
CDS Infomation

[gene=LOC107804852] [db_xref=GeneID:107804852] [protein=cyclin-dependent kinase C-1-like] [protein_id=XP_016484276.1] [location=join(2315..2424,4057..4138,4272..4362,4460..4489,4587..4696,4795..4867,4965..5085,5195..5312,10842..10981,11072..11129,13094..13164,13371..13896)] [gbkey=CDS]
Sequence

ATGGCAGTGGCTGCTTATGGTCAGCTGAATCTTGAAGAATCGCCATTGTGGGGTTCTCGA
AGTGTCGACTGCTTCGAAAAGCTTGAACAAATCGGTGAAGGAACTTATGGGCAAGTGTAC
ATGGCCAGAGAAAAGGCAACTGGGGAAATTGTTGCTTTGAAAAAGATACGTATGGACAAT
GAGAAGGAGGGGTTCCCAATAACAGCCATCCGCGAGATTAAAATTCTAAAGAAATTGCAA
CATGAAAATGTCATTCAGCTAAAAGAGATAGTAACCTCCCAAGGTCCTGAAGGGGATGAA
CAAGGGAAGCTAGATAATAACAAGTACAAGGGAAACATTTACATGGTTTTTGAATACATG
GATCATGACTTGACTGGACTTGCTGATCGACCAGGGTTGAGATTCACAATTCCGCAGATT
AAATGCTACATGAAGCAACTCCTTACTGGTCTTCATTACTGCCATGTTAATCAAGTTCTT
CACAGAGATATCAAAGGCTCTAATCTTCTGATAGATAATGAAGGAAATCTGAAGCTTGCT
GATTTTGGTTTAGCACGGTCATTTTCTGGTGATCACAATGCTAATCTGACAAATCGTGTT
ATTACTCTGTGGTACAGACCTCCAGAGTTGTTGCTTGGAGCCACAAAGTATGGCCCAGCT
GTTGACATGTGGTCCGTTGGTTGTATATTTGCTGAACTTCTATTCGGGAAGCCAATCTTA
CCTGGAAAAAATGAGCCTGAACAGTTGACCAAAATATATGAGCTTTGTGGAACCCCTGAT
GAAATTAATTGGCCTGGTGTATCAAAGATTCCTTGGTATGGCAAGTTCAAGCCAGCAAGG
CCAATGAAAAGACGAGTTAGAGAGGTCTTTAGGCATTTTGATCGCCACGCTTTGGATTTA
TTAGACAAAATGCTGACTCTTGATCCATCTCAGAGAATATGTGCAAAGGATGCTCTAGAT
GCTGAATATTTCTGGACCGACCCTTTACCTTGTGATCCTAGAAGCCTACCAAAATATGAA
TCATCACACGAGTTCCAGACTAAGAAAAAACGGCAACAGCAGCGACAGAATGAAGAAATG
GCCAAAAGACAGAAGCTGCAGCACCCACAGCAACATTCACGCCTCCCTCCTATCCAACAG
TCTGGGCAAGGTCATTCCCAGCACTGGGGTGGACCTAATCATCAAACCCAGCCTGCAATA
TCTGCTGGAGCTGGTCATCATCAATATGGAAAGCCTCGTGGTCCTGGAGGGCAAAATCGG
TATCCTCCAGGTGGAAACCCTGGTGGGGGGTATTATCAAGATCGTGGGGCACAAGGCGGA
GGTTATAGTAGTGGGACATATCCACCTCAGGGACGAGCCCCACCTTATCCTGGTAGTGGG
GTGGCTTCCAGTGGTCCTCGGGGACCAAGTGGTGGCTATGGTGTTCCTCCTAGTTACTCC
CAAAGTGGTCAATATGGAGGTTCTGGTGCAGGGAGAGGTTCAAACCAAATGAGTGGAAAC
CGTAACCAGCAGTATGGTTGGCAGCAATAG

Peptide Sequence

PEP ID

XP_016484276.1
PEP Infomation

PREDICTED: cyclin-dependent kinase C-1-like [Nicotiana tabacum]
Sequence

MAVAAYGQLNLEESPLWGSRSVDCFEKLEQIGEGTYGQVYMAREKATGEIVALKKIRMDN
EKEGFPITAIREIKILKKLQHENVIQLKEIVTSQGPEGDEQGKLDNNKYKGNIYMVFEYM
DHDLTGLADRPGLRFTIPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLA
DFGLARSFSGDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLFGKPIL
PGKNEPEQLTKIYELCGTPDEINWPGVSKIPWYGKFKPARPMKRRVREVFRHFDRHALDL
LDKMLTLDPSQRICAKDALDAEYFWTDPLPCDPRSLPKYESSHEFQTKKKRQQQRQNEEM
AKRQKLQHPQQHSRLPPIQQSGQGHSQHWGGPNHQTQPAISAGAGHHQYGKPRGPGGQNR
YPPGGNPGGGYYQDRGAQGGGYSSGTYPPQGRAPPYPGSGVASSGPRGPSGGYGVPPSYS
QSGQYGGSGAGRGSNQMSGNRNQQYGWQQ

Transcript Sequence

Gene sequence data has not been registered.